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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905175.1_cds_XP_016455366.1_49301
CDS Infomation

[gene=LOC107779444] [db_xref=GeneID:107779444] [protein=heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like] [protein_id=XP_016455366.1] [location=complement(17302..18255)] [gbkey=CDS]
Sequence

ATGAGTTCATTTTCCATTTTAATAACATTTCAGATTCAAGAATTTAGCATGGCAAGGGTC
TTTTGTTCTATCAATGGTTCAGCAAACCTCCCCACTTCAGTTAGGTGTTCATATTCATCA
TGTTACAAGCCAATGGTAGTTAAAATGGGCCATGATCAATCCTACCGGGCCTCCATCGAA
TCTGAAATTGAAGCCCATCTTAAGAAGGTCATATCAATTAGGCCACCTCAATCTGTCTTC
GAGCCCATGCATTACTTGACGTTTACAACAACACCCAAATCCACAGCATCAGCCTTATGC
GTTGCGGCGTGCGAGCTGGTAGGTGGCGAAAGGGTCCAAGCCATGGCTGCAGCATCAGCA
ATACATCTCATGCATGTTGCTACTTACACCCACCAACACATGCACAGTTCCGGGCCCAAG
CCCGCAATCGACCACAAGTTCGGCCCGAATATCGAGCTTCTCACGGGAGATGGTATCATG
GCCTTTGCTATTGAACTACTAGCCAAAGCCATGAACCCGGCCCGAGAGAACTCGAACAAG
ATCTTAAGGGTTATTACTGAGGTCACACGAGCTGTAGGGTCACAGGGATTGCTAGAAGGC
CAATTTAGGGAGATAGAATGGAAGGAATCAGGCAATGGAGATGAGAAGTTATGGGAATAC
GCGTGCAAGAAGAAAGAAGGAGAGATTCATGCATGTGGAGCTGCTTGTGGAGCCATTTTA
GGAGATGGAAGTGATGAAGAAGTAGAAAGCTTGAGGAATTATGGGGTTTATGTTGGAATA
ATACAAGGAATGATAAATGGAGTAGGAAAAAATAATTACAAGAAAAGAGTGGAAGAACTG
AGAATATTCGCTATGAAGGAATTGCAGACACATTTCAAAGGAAAGAAGGTGAGGCCAATT
GCTAGTCTTATTGAAGAGAGTTTCGTGCCTCGATCACAATGTGATCTTCTTTAG

Peptide Sequence

PEP ID

XP_016455366.1
PEP Infomation

PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Nicotiana tabacum]
Sequence

MSSFSILITFQIQEFSMARVFCSINGSANLPTSVRCSYSSCYKPMVVKMGHDQSYRASIE
SEIEAHLKKVISIRPPQSVFEPMHYLTFTTTPKSTASALCVAACELVGGERVQAMAAASA
IHLMHVATYTHQHMHSSGPKPAIDHKFGPNIELLTGDGIMAFAIELLAKAMNPARENSNK
ILRVITEVTRAVGSQGLLEGQFREIEWKESGNGDEKLWEYACKKKEGEIHACGAACGAIL
GDGSDEEVESLRNYGVYVGIIQGMINGVGKNNYKKRVEELRIFAMKELQTHFKGKKVRPI
ASLIEESFVPRSQCDLL

Transcript Sequence

Gene sequence data has not been registered.